{"id":5070,"date":"2023-05-05T07:40:26","date_gmt":"2023-05-05T05:40:26","guid":{"rendered":"https:\/\/cetaf.org\/dest\/?page_id=5070"},"modified":"2023-11-12T17:40:38","modified_gmt":"2023-11-12T16:40:38","slug":"digitisation-of-natural-history-collections-from-data-quality-to-cleaning-and-data-publishing-2","status":"publish","type":"page","link":"https:\/\/cetaf.org\/dest\/digitisation-of-natural-history-collections-from-data-quality-to-cleaning-and-data-publishing-2\/","title":{"rendered":"Digitisation of Natural History collections: From data quality to data cleaning and data publishing"},"content":{"rendered":"<p>[et_pb_section fb_built=&#8221;1&#8243; _builder_version=&#8221;4.16&#8243; global_colors_info=&#8221;{}&#8221;][et_pb_row _builder_version=&#8221;4.16&#8243; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;4.16&#8243; custom_padding=&#8221;|||&#8221; global_colors_info=&#8221;{}&#8221; custom_padding__hover=&#8221;|||&#8221;][et_pb_text _builder_version=&#8221;4.18.0&#8243; background_size=&#8221;initial&#8221; background_position=&#8221;top_left&#8221; background_repeat=&#8221;repeat&#8221; hover_enabled=&#8221;0&#8243; global_colors_info=&#8221;{}&#8221; sticky_enabled=&#8221;0&#8243;]<\/p>\n<h3 style=\"text-align: center;\"><strong>Digitisation o<\/strong><strong>f Natural History<\/strong><strong> collections: From data quality to data cleaning and data publishing &#8211; A hands-on experience<\/strong><\/h3>\n<p>&nbsp;<\/p>\n<p><img loading=\"lazy\" class=\"wp-image-4965 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/dest-digidization-2023-new-300x209.jpg\" alt=\"\" width=\"300\" height=\"209\" \/><\/p>\n<p><strong>DESCRIPTION<\/strong><\/p>\n<p><b>The CETAF-DEST Training course &#8220;<\/b><strong>Digitisation of Natural History collections: From data quality to cleaning and data publishing. A hands-on experience&#8221;<\/strong> will target the basic and important steps and standards of the digitisation process of all biological, geological, palaeontological &amp; mineralogical data of the natural history collections. These are:<\/p>\n<ul>\n<li><b>Data quality<\/b> for ensuring the maximum quality when digitising taxonomic, geographical, collection and descriptive data such as taxonomic data, specimens and materials, literature data, field work notes, occurrence data, remote sensing data, etc.<\/li>\n<li><b>Data cleaning<\/b><span style=\"color: #000000;\"> in order to improve the quality of data and make them \u201cfit-for-use\u201d by defining and determining error types, search and identify error instances, correct the errors, document error instances and error types and modify data entry procedures to reduce future errors.<\/span><\/li>\n<\/ul>\n<ul>\n<li>The <strong>data visualisation<\/strong> focusing in applying visualisation techniques in clean data.<\/li>\n<\/ul>\n<ul>\n<li><b>Biodiversity Data Standards<\/b>, such as Darwin Core, which are documented agreements on representation, format, definition, structuring, tagging, transmission, manipulation, use, and management of data, in order to ensure that data can be easily verified, analysed and reused by the wider scientific community.<\/li>\n<\/ul>\n<ul>\n<li><b>ABCDEFG Standards<\/b> which give access to Biological Collection Databases extended for Geosciences.<\/li>\n<\/ul>\n<ul>\n<li><b>Publishing of data<\/b> using the IPT (INTEGRATED PUBLISHING TOOLKIT) for the biological data and the GeoCASe platform for the geological, palaeontological &amp; mineralogical data.<\/li>\n<\/ul>\n<ul>\n<li>The <b>types of Data Sets<\/b> convenient for publication in GeoCASe platform.<\/li>\n<\/ul>\n<p>The course will be a 5 days \u2019hands-on experience, since, according to its schedule, most of the time is dedicated to exercises on data quality and cleaning while group work will ensure and motivate interaction between trainees and trainers and foster lively discussions. Moreover, trainees will have the possibility to bring sample(s) of their institutional biodiversity and geodiversity digital database and exercise on them.<\/p>\n<p>The course has been evaluated as a successful course through its four times implementation and standardisation in the frames of the EU COST Action CA17106 on \u201cMobilising Data, Experts and Policies in Scientific Collections-MOBILISE\u201d.<\/p>\n<p><strong>TARGET GROUPS<\/strong><\/p>\n<p>The course is addressed to everyone who is engaged in biological and geological collections and their data, such as Curators and Collections\u2019 managers, Directors\/Senior managers, Collections\u2019 Digitization managers\/officers, Scientists on bio- or geo informatics, Students (Graduates, Post graduates, MSc, PhD), Technicians of collections.<\/p>\n<table width=\"662\">\n<tbody>\n<tr>\n<td colspan=\"2\" width=\"662\"><strong>\u00a0<\/strong><strong>TRAINERS SHORT CVs<\/strong><\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5004 size-full aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Brosens.jpg\" alt=\"\" width=\"92\" height=\"126\" \/><\/td>\n<td width=\"497\"><strong>Dimitri Brosens, <\/strong>MSc, is the Biodiversity Data Liaison Manager from the Belgian Biodiversity Platform in the Flemish Research Institute for Nature and Forest since early 2009. Since 2021 he also acts as the GBIF node manager for Belgium. The ultimate goal of Dimitri is to get Belgium on the world map of biodiversity data. He has a particular interest in the publication, standardization and interoperability of biodiversity datasets.<\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5009 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Tykarski.jpg\" alt=\"\" width=\"103\" height=\"141\" \/><\/td>\n<td width=\"497\">Dr <strong>Piotr Tykarski<\/strong> works at the University of Warsaw, teaching entomology, invertebrate zoology, ecology and GIS. His scientific interests focus on saproxylic beetles and, factors and patterns in biodiversity. He has been involved in biodiversity informatics activities and GBIF in Poland since 2003. Currently in this respect he plays a double role of a node manager and a HoD of GBIF for Poland.<\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5006 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Rainer.jpg\" alt=\"\" width=\"102\" height=\"129\" \/><\/td>\n<td width=\"497\">Dr <strong>Heimo Rainer<\/strong> is a curator in the Viennese Herbaria of the NHM (W) and the University (WU) and coordinates digitization there. They have established the Virtual Herbaria Platform JACQ a consortium of 40+ institutions and individuals. His research focus is the taxonomy of a tropical plant genus Annona.<\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5007 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Smirnova.jpg\" alt=\"\" width=\"98\" height=\"130\" \/><\/td>\n<td width=\"497\">Dr\u00a0<strong>Larissa Smirnova<\/strong>\u00a0is assistant at Royal Museum for Central Africa where she currently coordinates Synthesys+ project. Since 2009 she has been involved in different European and national projects connected to biodiversity informatics and digitization. She is also part of the GBIF mentoring and training program and has participated as invited coach in a number of training courses on data publishing.<\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5010 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Voreadou.jpg\" alt=\"\" width=\"92\" height=\"135\" \/><\/td>\n<td width=\"497\">Dr <strong>Catherina<\/strong> <strong>Voreadou<\/strong> is the head of Hydrobiology Lab of the Natural History Museum of the University of Crete. In parallel, since 1998 she is the head of Education and since 2012 she is leading also the Centre of Environmental Training of NHMC responsible for Life Long Learning. Member of the Greek National Accreditation Centre for Continuing Vocational Training (EKEPIS), as trainer for adults. She has coordinated or participated in 19 Research Educational and Training projects funded either by National or European sources. She is the author and editor of many Educational editions.<\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5008 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Stathi.jpg\" alt=\"\" width=\"91\" height=\"118\" \/><\/td>\n<td width=\"497\">Dr <strong>Iasmi Stathi <\/strong>is a scorpiologist in the Natural History Museum of the University of Crete. Member of the Greek National Accreditation Centre for Continuing Vocational Training (EKEPIS), as trainer for adults. Sixteen years of experience in Environmental Education Programs, Training for Life Long Learning Education and Education Research and Development at the Dept. of Education, NHMC-UOC. She has also participated in 18 Research Educational projects funded either by National or European sources.<\/td>\n<\/tr>\n<tr>\n<td width=\"165\"><img loading=\"lazy\" class=\"wp-image-5005 size-medium aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/05\/Margetousaki.jpg\" alt=\"\" width=\"125\" height=\"124\" \/><\/td>\n<td width=\"497\"><strong>Athanasia Margetousaki<\/strong>, is a Pedagogist and has a postgraduate degree in Teaching Science. She works as a Special Technical Scientific Staff (EIB) at the Natural History Museum of Crete of the University of Crete. She has many years of experience in adult education by participating in adult education and training programs. She has participated in many research projects funded by European and national resources. She has also participated with announcements in national and world conferences.<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p><strong>REGISTRATION FEE<\/strong><\/p>\n<p>500\u20ac It includes coffees and lunches. For accommodation and dinners special prices have been arranged.<\/p>\n<p><strong>PAYMENT OF FEES<\/strong><\/p>\n<p>Registration is free.<br \/>Only the trainees who will be selected to participate the course will be requested to pay the fees. This will happen after the registration deadline.<\/p>\n<p><strong>REGISTRATION DEADLINE<\/strong><\/p>\n<p><strong>Registration has closed on 10 July 2023<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>MODE OF TRAINEES&#8217; ASSESSMENT<\/strong><\/p>\n<p>Through the hands-on exercises in the daily program<\/p>\n<p>&nbsp;<\/p>\n<p><strong>PARTICIPANT QUOTA (min and max number of trainees)<\/strong><\/p>\n<p>Min 15 &#8211; Max 20 trainees<\/p>\n<p>&nbsp;<\/p>\n<p><strong>DAILY PROGRAM\u00a0<\/strong><\/p>\n<p><em>Important info<\/em><\/p>\n<p>All hands-on exercises in the daily program will be implemented in parallel groups:<\/p>\n<ul>\n<li>Trainees managing Biological data<\/li>\n<li>Trainees managing Geological, Palaeontological, Mineralogical data<\/li>\n<\/ul>\n<p><strong>\u00a0<\/strong><\/p>\n<h4 style=\"color: #ff6347;\"><strong>Day 1:\u00a0 <\/strong><strong>13\/11\/2023<\/strong><\/h4>\n<p><strong>09.00 &#8211; 09.30\u00a0<\/strong><strong>WELCOME, GAME for GETTING TO KNOW EACH OTHER<\/strong><\/p>\n<p><strong><br \/>SESSION A<\/strong><\/p>\n<p><strong>09.30 \u2013 10.00 <\/strong><strong>PRESENTATION OF THE TRAINING COURSE, TRAINEES\u2019 EXPECTATIONS<br \/><\/strong><em>Catherina Voreadou, Iasmi Stathi, Athanasia Margetousaki<\/em><\/p>\n<p><strong>10.00 \u2013 10.30\u00a0<\/strong><strong>RECOVERY OF PREVIOUS KNOWLEDGE<br \/><\/strong><em>Catherina Voreadou, Iasmi Stathi, Athanasia Margetousaki<\/em><\/p>\n<p><strong>10.30 \u2013 11.00\u00a0<\/strong><strong>Coffee <\/strong><strong>\u00a0<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>SESSION B<\/strong><\/p>\n<p><strong>11.00 \u2013 11.30\u00a0<\/strong><strong>INTRODUCTION TO BIODIVERSITY DATA STANDARDS, DISCUSSION<br \/><\/strong><em>Larissa Smirnova <\/em><\/p>\n<p><strong>11.30 \u2013 12.00\u00a0<\/strong><strong>GBIF, IPT (INTEGRATED PUBLISHING TOOLKIT), TYPES OF DATA SET CONVENIENT FOR PUBLICATION IN GBIF, DISCUSSION<br \/><\/strong><em>Piotr Tykarski, Dimitri Brosens<\/em><\/p>\n<p><strong>12.00 \u2013 12.30\u00a0<\/strong><strong>GeoCASe &#8211; <\/strong><strong>ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES), TYPE OF <\/strong><strong>DATA SETS CONVENIENT FOR PUBLICATION IN GeoCASe, DISCUSSION<br \/><\/strong><em>\u00a0Heimo Rainer<\/em><\/p>\n<p><strong>12.30 \u2013 13.00\u00a0<\/strong><strong>OVERALL DISCUSSION<\/strong><\/p>\n<p><strong>13.00 &#8211; 14.00\u00a0<\/strong><strong>Lunch<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>SESSION C<\/strong><\/p>\n<p><strong>14.00-15.30\u00a0<\/strong><strong>HANDS ON EXERCISE in <\/strong><strong>parallel groups<\/strong><\/p>\n<ul>\n<li><strong>DATA QUALITY &amp; CLEANING, PREPARATION OF DATA SETS<\/strong><\/li>\n<li><strong>Software: OPEN REFINE\/QGIS\/R-studio\/Other tools<br \/><\/strong><em>Dimitri Brosens,<\/em><em> Piotr Tykarski, Heimo Rainer, <\/em><em>Larissa Smirnova<\/em><\/li>\n<\/ul>\n<p><strong>15.30-16.00\u00a0<\/strong><strong>Coffee<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>SESSION D<\/strong><\/p>\n<p><strong>16.00- 17.00\u00a0<\/strong><strong>HANDS ON EXERCISE in <\/strong><strong>parallel groups <\/strong><\/p>\n<ul>\n<li><strong>DATA QUALITY &amp; CLEANING, PREPARATION OF DATA SETS<\/strong><\/li>\n<li><strong>Software: OPEN REFINE\/QGIS\/R-studio\/Other tools<br \/><\/strong><em>Dimitri Brosens,<\/em><em> Piotr Tykarski, Heimo Rainer, <\/em><em>Larissa Smirnova<\/em><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<h4 style=\"color: #ff6347;\"><strong>Day 2: <\/strong><strong>14\/11\/2023<\/strong><\/h4>\n<p><strong>SESSION E<\/strong><\/p>\n<p><strong>09.00 \u2013 11.00\u00a0<\/strong><strong>HANDS ON EXERCISE in <\/strong><strong>parallel groups <\/strong><\/p>\n<ul>\n<li><strong>DATA QUALITY &amp; CLEANING, PREPARATION OF DATA SETS<\/strong><\/li>\n<li><strong>Software: OPEN REFINE\/QGIS\/R-studio\/Other tools<br \/><\/strong><em>Dimitri Brosens,<\/em><em> Piotr Tykarski, Heimo Rainer, <\/em><em>Larissa Smirnova<\/em><\/li>\n<\/ul>\n<p><strong>11.00 \u2013 11.30\u00a0<\/strong><strong>Coffee<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>SESSION F<\/strong><\/p>\n<p><strong>11.30 \u2013 13.00\u00a0<\/strong><strong>HANDS ON EXERCISE in <\/strong><strong>parallel groups <\/strong><\/p>\n<ul>\n<li><strong>DATA QUALITY &amp; CLEANING, PREPARATION OF DATA SETS<\/strong><\/li>\n<li><strong><strong>Software: OPEN REFINE\/QGIS\/R-studio\/Other tools<br \/><\/strong><\/strong><i>Dimitri Brosens,<\/i><span style=\"color: #000000;\"><span lang=\"en-GB\"><i> Piotr Tykarski, Heimo Rainer, <\/i><\/span><\/span><span style=\"color: #202124;\"><span lang=\"en-GB\"><i>Larissa Smirnova<\/i><\/span><\/span><\/li>\n<\/ul>\n<p><b>13.00 &#8211; 14:00 Lunch<\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION G <\/b><\/p>\n<p><b>14:00-15:30 HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><span lang=\"en-US\"><b>DATA QUALITY &amp; CLEANING, PREPARATION OF DATA SETS<\/b><\/span><\/li>\n<li><span lang=\"en-US\"><b>Software: OPEN REFINE\/QGIS\/R-studio\/Other tools<br \/><\/b><\/span><i>Dimitri Brosens,<\/i><span style=\"color: #000000;\"><span lang=\"en-GB\"><i> Piotr Tykarski, Heimo Rainer, <\/i><\/span><\/span><span style=\"color: #202124;\"><span lang=\"en-GB\"><i>Larissa Smirnova<\/i><\/span><\/span><\/li>\n<\/ul>\n<p><b> 15.30-16.00 Coffee<\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION H <\/b><\/p>\n<p><b>16.00- 17.00 HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><b>DATA QUALITY &amp; CLEANING, PREPARATION OF DATA SETS<\/b><\/li>\n<li><b>Software: OPEN REFINE\/QGIS\/R-studio\/Other tools<br \/><\/b><i>Dimitri Brosens,<\/i><i> Piotr Tykarski, Heimo Rainer, <\/i><i>Larissa Smirnova<\/i><\/li>\n<\/ul>\n<h4 style=\"color: #ff6347;\"><b><br \/>Day 3\u00a0 <\/b><b>15\/11\/2023<\/b><\/h4>\n<p><b>09.00 \u2013 17.00 Excursion in Crete. Lunch included<\/b><\/p>\n<h4 style=\"color: #ff6347;\"><b><br \/>Day 4\u00a0<\/b><b>16\/11\/2023<\/b><\/h4>\n<p><b> SESSION I 09.00 \u2013 11.00<\/b><\/p>\n<p><b>HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><span lang=\"en-US\"><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/span><\/li>\n<li><span lang=\"en-US\"><b>IPT (INTEGRATED PUBLISHING TOOLKIT), <\/b><\/span><span lang=\"en-GB\"><b>ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><\/span><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p><b> 11.00 \u2013 11.30 Coffee <\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION J 11.30 \u2013 13.00<\/b><\/p>\n<p><b> HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/li>\n<li><b>IPT (INTEGRATED PUBLISHING TOOLKIT), ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p><b>13.00 &#8211; 14:00 Lunch<\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION K 14.00-15.30<\/b><\/p>\n<p><b>HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><span lang=\"en-US\"><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/span><\/li>\n<\/ul>\n<ul>\n<li><b>IPT (INTEGRATED PUBLISHING TOOLKIT), ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p><b> 15.30-16.00 Coffee<\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION L 16.00- 17.00 <\/b><\/p>\n<p><b>HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/li>\n<\/ul>\n<ul>\n<li><b>IPT (INTEGRATED PUBLISHING TOOLKIT), ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<h4 style=\"color: #ff6347;\"><b>Day 5\u00a0<\/b><b>17\/11\/2023<\/b><\/h4>\n<p><b>SESSION K 09.00 \u2013 11.00<\/b><br \/><b>HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li lang=\"en-GB\"><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/li>\n<\/ul>\n<ul>\n<li><b> IPT (INTEGRATED PUBLISHING TOOLKIT), ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p><b> 11.00 \u2013 11.30 Coffee <\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION M 11.30 \u2013 13.00<\/b><\/p>\n<p><b> HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><span lang=\"en-US\"><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/span><\/li>\n<li><b>IPT (INTEGRATED PUBLISHING TOOLKIT), ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p><b> 13.00 &#8211; 14:00 Lunch<\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION N 14.00-15.30<br \/>HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><span lang=\"en-US\"><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/span><\/li>\n<li><span lang=\"en-US\"><b>IPT (INTEGRATED PUBLISHING TOOLKIT), ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/span><\/li>\n<\/ul>\n<p><b> 15.30-16.00 Coffee<\/b><\/p>\n<p>&nbsp;<\/p>\n<p><b>SESSION O 16.00- 17.00 <\/b><\/p>\n<p><b>HANDS ON EXERCISE in parallel groups<\/b><\/p>\n<ul>\n<li><span lang=\"en-US\"><b>PUBLISHING OF DATA &amp; METADATA IN GBIF &amp; GeoCASe<\/b><\/span><\/li>\n<li><span lang=\"en-US\"><b>IPT (INTEGRATED PUBLISHING TOOLKIT), <\/b><\/span><span lang=\"en-GB\"><b>ABCDEFG STANDARDS (ACCESS TO BIOLOGICAL COLLECTION DATABASES EXTENDED FOR GEOSCIENCES)<br \/><\/b><\/span><i>Dimitri Brosens, Piotr Tykarski, Heimo Rainer, Larissa Smirnova<\/i><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><strong>LEARNING OUTCOMES<\/strong><\/p>\n<p>By the end of this TS, trainees will have the knowledge, skills and competences in order to:<\/p>\n<ul>\n<li><b>Ensure<\/b>\u00a0the maximum quality when digitising taxonomic, geographical, collection and descriptive data<\/li>\n<li><b>Improve<\/b>\u00a0the quality of data<\/li>\n<li><b>Define<\/b>and<b> determine\u00a0<\/b>error types<\/li>\n<li><b>Search<\/b>\u00a0and\u00a0<b>identify<\/b>\u00a0error instances<\/li>\n<li><b>Correct<\/b>\u00a0the errors<\/li>\n<li><b>Document<\/b>\u00a0error instances and error types<\/li>\n<li><b>Modify<\/b>\u00a0data entry procedures to reduce future errors<\/li>\n<li><b>Visualise\u00a0<\/b>data entries<\/li>\n<li><b>Define<\/b> the Biodiversity Data Standards<b> <\/b>and the ABCDEFG Standards for Geosciences<\/li>\n<li><b>Practice <\/b>in the INTEGRATED PUBLISHING TOOLKIT and the GeoCASe platform<\/li>\n<li><b>Identify <\/b>the types of Data Sets convenient for publication in GeoCase<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><strong>LANGUAGE REQUIREMENTS<\/strong><\/p>\n<p>In order to follow the TS, trainees need a CEFR (<em>Common European Framework of Reference for Languages<\/em>) B1 level of English, as the formal language of the TS is English.<\/p>\n<p>&nbsp;<\/p>\n<p><strong>CERTIFICATIONS PROVIDED<\/strong><\/p>\n<ol>\n<li>Certificate of Attendance by CETAF DEST with ECVET Units (<em>European Credit system for Vocational Education and Training<\/em>)<\/li>\n<li>Certificate by CETAF DEST according to Europass Certificate Supplement (certifying analytically the knowledge, skills and competences gained)<\/li>\n<\/ol>\n<p>&nbsp;<\/p>\n<p><strong>TECHNOLOGY AND OTHER REQUIREMENTS<br \/><\/strong>Trainees are required to bring their own laptops. They are also recommended to bring sample(s) of their institutional biological, geological, palaeontological &amp; mineralogical digital databases in order to be exercised on them.<\/p>\n<p>&nbsp;<\/p>\n<p><strong>VENUE<br \/><\/strong><a href=\"https:\/\/www.nhmc.uoc.gr\/en\" target=\"_blank\" rel=\"noopener\">Natural History Museum of Crete-University of Crete<\/a><\/p>\n<p><strong>More details:\u00a0<\/strong><a href=\"mailto:dest@cetaf.org\">dest@cetaf.org<\/a><\/p>\n<p><strong>Application form<\/strong><\/p>\n<p>Registration has closed on 10 July 2023<\/p>\n<p>&nbsp;<\/p>\n<p><strong>Evaluation of the course<\/strong><\/p>\n<p><strong><a href=\"https:\/\/www.cognitoforms.com\/CETAFDEST\/DigitisationOfNaturalHistoryCollectionsFromDataQualityToDataCleaningAndDataPublishingAHandsonExperienceb\" target=\"_blank\" rel=\"noopener\">Before the course questionnaire<\/a><\/strong><\/p>\n<p><strong><a href=\"https:\/\/www.cognitoforms.com\/CETAFDEST\/DigitisationOfNaturalHistoryCollectionsFromDataQualityToDataCleaningAndDataPublishingAHandsonExperiencep\" target=\"_blank\" rel=\"noopener\">After the course questionnaire\u00a0<\/a><\/strong><\/p>\n<p><a href=\"https:\/\/www.cognitoforms.com\/CETAFDEST\/DigitisationOfNaturalHistoryCollectionsFromDataQualityToCleaningAndDataPublishingEvaluationForm\" target=\"_blank\" rel=\"noopener\"><strong>Evaluation form<\/strong><\/a><\/p>\n<p>[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Digitisation of Natural History collections: From data quality to data cleaning and data publishing &#8211; A hands-on experience &nbsp; DESCRIPTION The CETAF-DEST Training course &#8220;Digitisation of Natural History collections: From data quality to cleaning and data publishing. A hands-on experience&#8221; will target the basic and important steps and standards of the digitisation process of all [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"<img class=\"size-medium wp-image-4920 aligncenter\" src=\"https:\/\/cetaf.org\/dest\/wp-content\/uploads\/2023\/01\/MorphometricsDEST2-300x186.jpg\" alt=\"\" width=\"300\" height=\"186\" \/>\r\n\r\n<strong>Description<\/strong>\r\n\r\nThe aim of the course is to provide a general overview of the concepts, foundations, and methods of morphometrics (traditional and geometric morphometrics) and to illustrate its diverse applications in biological sciences (e.g., systematics, ecology, and evolution). The course includes lectures and practicals.\r\n\r\n<strong>Photographs<\/strong>\r\n\r\nJpg (max five pictures)\r\n\r\n<strong>Trainer<\/strong>\r\n\r\n<strong>Sylvain Gerber<\/strong>, UMR 7205 ISYEB \u2013 MNHN, <a href=\"https:\/\/isyeb.mnhn.fr\/fr\/annuaire\/sylvain-gerber-448\" target=\"_blank\" rel=\"noopener\">https:\/\/isyeb.mnhn.fr\/fr\/annuaire\/sylvain-gerber-448<\/a>\r\n\r\n<strong>Dates of Training period<\/strong>\r\n\r\n22 - 26\u00a0May 2023\r\n\r\n<strong>Course location<\/strong>\r\n\r\nMus\u00e9um National d\u2019 Histoire Naturelle, Paris, France\r\n\r\n<strong>Target audience<\/strong>\r\n<ul>\r\n \t<li>PhD students<\/li>\r\n \t<li>MSc students<\/li>\r\n \t<li>Researchers<\/li>\r\n \t<li>Technicians<\/li>\r\n \t<li>Curators<\/li>\r\n<\/ul>\r\n<strong>Mode of trainees\u2019 assessment:<\/strong> n.a. (the presence at the courses validates the ECTS)\r\n\r\n<strong>Recommended background<\/strong>\r\n\r\nSome familiarity with multivariate statistics and the R software environment is recommended.\r\n\r\n<strong>Registration deadline<\/strong>\r\n\r\n<span style=\"text-decoration: underline;\">30<sup>th<\/sup> of April 2023<\/span>\r\n\r\n<strong>Types of training<\/strong>\r\n\r\nTheoretical seminars\/lectures: 2.5 days\r\n\r\nPractical experience: 2.5 days\r\n\r\n<strong>Payment of fees \u2013 Registration procedure<\/strong>\r\n\r\nOnly for non students, free for students\r\n\r\nTravel and accommodation are at the charge of the participants.\r\n\r\nBy email to the contact person (Sylvain Gerber)\r\n\r\n<strong>Participant quota (min and max number of trainees)<\/strong>\r\n\r\nMin: 10 - Max: 20 trainees\r\n\r\n*Course will be cancelled when less students than the minimal number register\r\n\r\n<strong>Course\u2019s language<\/strong>\r\n\r\nEnglish\r\n\r\n<strong>Certifications provided<\/strong>\r\n\r\nECTS\r\n\r\n<strong>Technology requirements and personal equipment<\/strong>\r\n\r\nTrainees can bring their own laptops, but this is not mandatory.\r\n\r\n<strong>Learning outcomes:<\/strong>\r\n\r\nWorking knowledge of the various morphometric methods and ability to fully implement a morphometric study (choice of descriptors, data acquisition, statistical analyses, interpretations, and visualizations).\r\n\r\n<strong>More details: <\/strong>\r\n\r\n<strong>Sylvain Gerber\r\n<\/strong>MNHN, ISYEB,\r\n45 rue Buffon, 75005 Paris\r\n\r\ne-mail:<a href=\"mailto:sylvain.gerber@mnhn.fr\">sylvain.gerber@mnhn.fr<\/a>\r\n\r\n<a href=\"https:\/\/isyeb.mnhn.fr\/fr\/annuaire\/sylvain-gerber-448\" target=\"_blank\" rel=\"noopener\">https:\/\/isyeb.mnhn.fr\/fr\/annuaire\/sylvain-gerber-448<\/a>\r\n\r\n<strong>Registration<\/strong>\r\n\r\nBy email to the contact person (Sylvain Gerber, <a href=\"mailto:sylvain.gerber@mnhn.fr\">sylvain.gerber@mnhn.fr<\/a>)","_et_gb_content_width":""},"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v20.6 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Digitisation of Natural History collections: From data quality to data cleaning and data publishing - DEST (Distributed European School of Taxonomy)<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/cetaf.org\/dest\/digitisation-of-natural-history-collections-from-data-quality-to-cleaning-and-data-publishing-2\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Digitisation of Natural History collections: From data quality to data cleaning and data publishing - DEST (Distributed European School of Taxonomy)\" \/>\n<meta property=\"og:description\" content=\"Digitisation of Natural History collections: From data quality to data cleaning and data publishing - A hands-on experience &nbsp; DESCRIPTION The CETAF-DEST Training course &quot;Digitisation of Natural History collections: From data quality to cleaning and data publishing. 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